Data, Walker, 1862
publication ID |
https://doi.org/ 10.11646/zootaxa.4742.2.10 |
publication LSID |
lsid:zoobank.org:pub:A0AE93A2-348E-4686-9B38-32ECED90C2EA |
DOI |
https://doi.org/10.5281/zenodo.3684883 |
persistent identifier |
https://treatment.plazi.org/id/03869138-FFA1-870F-7DCB-F802FAE4FEDA |
treatment provided by |
Plazi |
scientific name |
Data |
status |
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Data View in CoL analysis
Forward and reverse sequences were assembled and manually edited using the SeqMan software (DNAStar). We added to our dataset the COI sequences of Chirocentrus dorab , Dussumieria acuta , Nematalosa nasus , Sardinella albella , and Sardinella gibbosa (non-engraulid Clupeoidei) and Denticeps clupeoides (Denticipoidei) as out group to root our phylogenetic tree. All sequences were aligned using CLUSTAL W ( Thompson et al. 1994) in Meg Align software (DNAStar) and variable sites were determined. Pairwise sequence divergence was calculated by using Kimura’s two-parameter (K2P) distance ( Kimura 1980). Maximum Likelihood (ML) trees with bootstrap analysis of 1000 replicates based on K2P distance were constructed in MEGA version 6.0 ( Tamura et al. 2013).
No known copyright restrictions apply. See Agosti, D., Egloff, W., 2009. Taxonomic information exchange and copyright: the Plazi approach. BMC Research Notes 2009, 2:53 for further explanation.